PyMAIA_downsample_modality script

Script to downsample the modality of a given NIFTI dataset, using another modality as reference.

usage: PyMAIA_downsample_modality [-h] --data-folder DATA_FOLDER
                                  --input-modality INPUT_MODALITY
                                  --ref-modality REF_MODALITY
                                  --output-modality OUTPUT_MODALITY [-v | -q]

Named Arguments

--data-folder

Patient NIFTI dataset folder.

--input-modality

Input modality suffix.

--ref-modality

Reference modality suffix.

--output-modality

Output modality suffix.

-v, --verbose

Enable verbose output in terminal. Add multiple times to increase verbosity.

-q, --silent

Suppress most log outputs in terminal.

Example call:

PyMAIA_downsample_modality  --data-folder /PATH/TO/NIFTI_DATASET --input-modality _CT.nii.gz --ref-modality _PET.nii.gz --output-modality _downsampled_CT.nii.gz